Experiment information
Accession CRX019716
Organism Pseudomonadota
Title start experiment_rep3
BioProject PRJCA000532
BioSample SAMC016304
Platform Illumina MiSeq
Library
Library name Construction protocol Strategy Source Selection Layout
All amplicons per time point and replicate were pooled on a mass basis to yield 18 amplicon pools in total: 16S rRNA : narG : napA : nrfA : nirS : nirK = 46 : 15 : 21 : 10 : 8. Adaptamers including barcodes were ligated to amplicon pools for sequencing library generation according to standard protocols prior to paired-end sequencing on a Illumina MiSeq platform utilizing V2 chemistry (2 x 250 bp). RNA-Seq TRANSCRIPTOMIC RT-PCR PAIRED
Processing Planned read length (bp) for mate 1: 250
Planned read length (bp) for mate 2: 250
Insert size (bp): 50
Release date2019-02-09
Run
Run accession Run data file information
File nameFile size (MB)
CRR021488 CRR021488_f1.fastq.gz
CRR021488_r2.fastq.gz
2.73
3.47
CRR021489 CRR021489_f1.fastq.gz
CRR021489_r2.fastq.gz
3.51
2.59
CRR021490 CRR021490_f1.fastq.gz
CRR021490_r2.fastq.gz
2.29
2.87
CRR021491 CRR021491_f1.fastq.gz
CRR021491_r2.fastq.gz
2.99
2.43
CRR021492 CRR021492_f1.fastq.gz
CRR021492_r2.fastq.gz
0.84
1.19
CRR021493 CRR021493_f1.fastq.gz
CRR021493_r2.fastq.gz
1.46
1.06
CRR021494 CRR021494_f1.fastq.gz
CRR021494_r2.fastq.gz
2.42
2.94
CRR021495 CRR021495_f1.fastq.gz
CRR021495_r2.fastq.gz
2.86
2.41
CRR021496 CRR021496_f1.fastq.gz
CRR021496_r2.fastq.gz
3.41
4.67
CRR021497 CRR021497_f1.fastq.gz
CRR021497_r2.fastq.gz
5.06
3.93
CRR021498 CRR021498_f1.fastq.gz
CRR021498_r2.fastq.gz
0.43
0.62
CRR021499 CRR021499_f1.fastq.gz
CRR021499_r2.fastq.gz
0.63
0.44
SubmitterDianming Wu (dmwu@geo.ecnu.edu.cn)
OrganizationEast China Normal University
Date submitted2017-09-05