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Experiment information
Accession CRX019717
Organism Pseudomonadota
Title half an hour after the experiment started_rep1
BioProject PRJCA000532
BioSample SAMC016304
Platform Illumina MiSeq
Library
Library name Construction protocol Strategy Source Selection Layout
All amplicons per time point and replicate were pooled on a mass basis to yield 18 amplicon pools in total: 16S rRNA : narG : napA : nrfA : nirS : nirK = 46 : 15 : 21 : 10 : 8. Adaptamers including barcodes were ligated to amplicon pools for sequencing library generation according to standard protocols prior to paired-end sequencing on a Illumina MiSeq platform utilizing V2 chemistry (2 x 250 bp). RNA-Seq TRANSCRIPTOMIC RT-PCR PAIRED
Processing Planned read length (bp) for mate 1: 250
Planned read length (bp) for mate 2: 250
Insert size (bp): 50
Release date2019-02-09
Run
Run accession Run data file information
File nameFile size (MB)
CRR021500 CRR021500_f1.fastq.gz
CRR021500_r2.fastq.gz 		2.38
3.09
CRR021501 CRR021501_f1.fastq.gz
CRR021501_r2.fastq.gz 		3.03
2.22
CRR021502 CRR021502_f1.fastq.gz
CRR021502_r2.fastq.gz 		1.45
1.8
CRR021503 CRR021503_f1.fastq.gz
CRR021503_r2.fastq.gz 		1.83
1.46
CRR021504 CRR021504_f1.fastq.gz
CRR021504_r2.fastq.gz 		0.26
0.37
CRR021505 CRR021505_f1.fastq.gz
CRR021505_r2.fastq.gz 		0.47
0.34
CRR021506 CRR021506_f1.fastq.gz
CRR021506_r2.fastq.gz 		1.48
1.87
CRR021507 CRR021507_f1.fastq.gz
CRR021507_r2.fastq.gz 		1.97
1.57
CRR021508 CRR021508_f1.fastq.gz
CRR021508_r2.fastq.gz 		2.82
3.86
CRR021509 CRR021509_f1.fastq.gz
CRR021509_r2.fastq.gz 		4.13
3.11
CRR021510 CRR021510_f1.fastq.gz
CRR021510_r2.fastq.gz 		0.12
0.17
CRR021511 CRR021511_f1.fastq.gz
CRR021511_r2.fastq.gz 		0.16
0.12
SubmitterDianming Wu (dmwu@geo.ecnu.edu.cn)
OrganizationEast China Normal University
Date submitted2017-09-05
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