Experiment information
Accession CRX019719
Organism Pseudomonadota
Title half an hour after the experiment started_rep3
BioProject PRJCA000532
BioSample SAMC016304
Platform Illumina MiSeq
Library
Library name Construction protocol Strategy Source Selection Layout
All amplicons per time point and replicate were pooled on a mass basis to yield 18 amplicon pools in total: 16S rRNA : narG : napA : nrfA : nirS : nirK = 46 : 15 : 21 : 10 : 8. Adaptamers including barcodes were ligated to amplicon pools for sequencing library generation according to standard protocols prior to paired-end sequencing on a Illumina MiSeq platform utilizing V2 chemistry (2 x 250 bp). RNA-Seq TRANSCRIPTOMIC RT-PCR PAIRED
Processing Planned read length (bp) for mate 1: 250
Planned read length (bp) for mate 2: 250
Insert size (bp): 50
Release date2019-02-09
Run
Run accession Run data file information
File nameFile size (MB)
CRR021524 CRR021524_f1.fastq.gz
CRR021524_r2.fastq.gz
14.52
18.73
CRR021525 CRR021525_f1.fastq.gz
CRR021525_r2.fastq.gz
16.14
11.93
CRR021526 CRR021526_f1.fastq.gz
CRR021526_r2.fastq.gz
3.85
4.92
CRR021527 CRR021527_f1.fastq.gz
CRR021527_r2.fastq.gz
4.99
3.97
CRR021528 CRR021528_f1.fastq.gz
CRR021528_r2.fastq.gz
2.08
2.95
CRR021529 CRR021529_f1.fastq.gz
CRR021529_r2.fastq.gz
4.03
2.89
CRR021530 CRR021530_f1.fastq.gz
CRR021530_r2.fastq.gz
8.37
10.33
CRR021531 CRR021531_f1.fastq.gz
CRR021531_r2.fastq.gz
10.47
8.61
CRR021532 CRR021532_f1.fastq.gz
CRR021532_r2.fastq.gz
10.07
13.66
CRR021533 CRR021533_f1.fastq.gz
CRR021533_r2.fastq.gz
14.43
11.06
CRR021534 CRR021534_f1.fastq.gz
CRR021534_r2.fastq.gz
0.24
0.33
CRR021535 CRR021535_f1.fastq.gz
CRR021535_r2.fastq.gz
0.35
0.25
SubmitterDianming Wu (dmwu@geo.ecnu.edu.cn)
OrganizationEast China Normal University
Date submitted2017-09-06