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Experiment information
Accession CRX019726
Organism Pseudomonadota
Title end of the experiment_rep1
BioProject PRJCA000532
BioSample SAMC016304
Platform Illumina MiSeq
Library
Library name Construction protocol Strategy Source Selection Layout
All amplicons per time point and replicate were pooled on a mass basis to yield 18 amplicon pools in total: 16S rRNA : narG : napA : nrfA : nirS : nirK = 46 : 15 : 21 : 10 : 8. Adaptamers including barcodes were ligated to amplicon pools for sequencing library generation according to standard protocols prior to paired-end sequencing on a Illumina MiSeq platform utilizing V2 chemistry (2 x 250 bp). RNA-Seq TRANSCRIPTOMIC RT-PCR PAIRED
Processing Planned read length (bp) for mate 1: 250
Planned read length (bp) for mate 2: 250
Insert size (bp): 50
Release date2019-02-09
Run
Run accession Run data file information
File nameFile size (MB)
CRR021608 CRR021608_f1.fastq.gz
CRR021608_r2.fastq.gz 		4.57
5.94
CRR021609 CRR021609_f1.fastq.gz
CRR021609_r2.fastq.gz 		5.55
4.08
CRR021610 CRR021610_f1.fastq.gz
CRR021610_r2.fastq.gz 		3.27
4.11
CRR021611 CRR021611_f1.fastq.gz
CRR021611_r2.fastq.gz 		4.13
3.37
CRR021612 CRR021612_f1.fastq.gz
CRR021612_r2.fastq.gz 		0.57
0.82
CRR021613 CRR021613_f1.fastq.gz
CRR021613_r2.fastq.gz 		1.14
0.82
CRR021614 CRR021614_f1.fastq.gz
CRR021614_r2.fastq.gz 		5.34
6.57
CRR021615 CRR021615_f1.fastq.gz
CRR021615_r2.fastq.gz 		6.9
5.71
CRR021616 CRR021616_f1.fastq.gz
CRR021616_r2.fastq.gz 		11.95
15.92
CRR021617 CRR021617_f1.fastq.gz
CRR021617_r2.fastq.gz 		16.77
13.03
CRR021618 CRR021618_f1.fastq.gz
CRR021618_r2.fastq.gz 		0.28
0.39
CRR021619 CRR021619_f1.fastq.gz
CRR021619_r2.fastq.gz 		0.41
0.29
SubmitterDianming Wu (dmwu@geo.ecnu.edu.cn)
OrganizationEast China Normal University
Date submitted2017-09-06
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