Experiment information
Accession CRX019731
Organism Proteobacteria
Title HONO wet peak_rep3
BioProject PRJCA000532
BioSample SAMC016304
Platform Illumina MiSeq
Library
Library name Construction protocol Strategy Source Selection Layout
All amplicons per time point and replicate were pooled on a mass basis to yield 18 amplicon pools in total: 16S rRNA : narG : napA : nrfA : nirS : nirK = 46 : 15 : 21 : 10 : 8. Adaptamers including barcodes were ligated to amplicon pools for sequencing library generation according to standard protocols prior to paired-end sequencing on a Illumina MiSeq platform utilizing V2 chemistry (2 x 250 bp). RNA-Seq TRANSCRIPTOMIC RT-PCR PAIRED
Processing Planned read length (bp) for mate 1: 250
Planned read length (bp) for mate 2: 250
Insert size (bp): 50
Release date2019-02-09
Run
Run Accession Release date Run Data File Information
File nameFile size (MB)
CRR021668 2019-02-09 pattern01_pattern02_1201_R_R1_001_f.fastq.gz
pattern01_pattern02_1201_R_R2_001_f.fastq.gz
6.16
7.93
CRR021669 2019-02-09 pattern02_pattern01_1201_R_R1_001_f.fastq.gz
pattern02_pattern01_1201_R_R2_001_f.fastq.gz
8.03
5.93
CRR021670 2019-02-09 pattern03_pattern04_1201_R_R1_001_f.fastq.gz
pattern03_pattern04_1201_R_R2_001_f.fastq.gz
3.55
4.73
CRR021671 2019-02-09 pattern04_pattern03_1201_R_R1_001_f.fastq.gz
pattern04_pattern03_1201_R_R2_001_f.fastq.gz
4.62
3.86
CRR021672 2019-02-09 pattern05_pattern06_1201_R_R1_001_f.fastq.gz
pattern05_pattern06_1201_R_R2_001_f.fastq.gz
0.53
0.75
CRR021673 2019-02-09 pattern06_pattern05_1201_R_R1_001_f.fastq.gz
pattern06_pattern05_1201_R_R2_001_f.fastq.gz
1.04
0.75
CRR021674 2019-02-09 pattern07_pattern08_1201_R_R1_001_f.fastq.gz
pattern07_pattern08_1201_R_R2_001_f.fastq.gz
7.22
9.08
CRR021675 2019-02-09 pattern08_pattern07_1201_R_R1_001_f.fastq.gz
pattern08_pattern07_1201_R_R2_001_f.fastq.gz
9.66
7.68
CRR021676 2019-02-09 pattern09_pattern10_1201_R_R1_001_f.fastq.gz
pattern09_pattern10_1201_R_R2_001_f.fastq.gz
11.26
15.59
CRR021677 2019-02-09 pattern10_pattern09_1201_R_R1_001_f.fastq.gz
pattern10_pattern09_1201_R_R2_001_f.fastq.gz
17.32
13.07
CRR021678 2019-02-09 pattern11_pattern12_1201_R_R1_001_f.fastq.gz
pattern11_pattern12_1201_R_R2_001_f.fastq.gz
1.03
1.48
CRR021679 2019-02-09 pattern12_pattern11_1201_R_R1_001_f.fastq.gz
pattern12_pattern11_1201_R_R2_001_f.fastq.gz
1.43
1.03
SubmitterDianming Wu (dmwu@geo.ecnu.edu.cn)
OrganizationsEast China Normal University
Date submitted2017-09-06