CRA000465 Information
Title: RNA-seq, WGBS and ChIP-seq (H3K4me2 and H3K27me3) of triple negative breast cancer stem cells and non-cancer stem cells
BioProject: PRJCA000539 / CRP000339
Release date: 2019-09-04
Experiments & Runs
Experiment Accession Title Taxon Name Platform Sample accession
CRX019706 ChIP-Seq (H3K27me3) of NCSC Homo sapiens Illumina HiSeq 3000 SAMC016542
CRS014242
Run Accession Run Alias Run Data File Information
CRR021485 NCSC_H3K27me3_BiologicalReplicate1 File: CRR021485_f1.fastq.gz
File: CRR021485_r2.fastq.gz
CRR021486 NCSC_H3K27me3_BiologicalReplicate2 File: CRR021486_f1.fastq.gz
File: CRR021486_r2.fastq.gz
CRR021487 NCSC_H3K27me3_Input File: CRR021487_f1.fastq.gz
File: CRR021487_r2.fastq.gz
CRX019705 ChIP-Seq (H3K27me3) of CSC Homo sapiens Illumina HiSeq 3000 SAMC016541
CRS014236
Run Accession Run Alias Run Data File Information
CRR021482 CSC_H3K27me3_BiologicalReplicate1 File: CRR021482_f1.fastq.gz
File: CRR021482_r2.fastq.gz
CRR021483 CSC_H3K27me3_BiologicalReplicate2 File: CRR021483_f1.fastq.gz
File: CRR021483_r2.fastq.gz
CRR021484 CSC_H3K27me3_Input File: CRR021484_f1.fastq.gz
File: CRR021484_r2.fastq.gz
CRX019704 ChIP-Seq (H3K4me2) of NCSC Homo sapiens Illumina HiSeq 2000 SAMC016542
CRS014242
Run Accession Run Alias Run Data File Information
CRR021479 NCSC_H3K4me2_BiologicalReplicate1 File: CRR021479.fastq.gz
CRR021480 NCSC_H3K4me2_BiologicalReplicate2 File: CRR021480.fastq.gz
CRR021481 NCSC_H3K4me2_Input File: CRR021481.fastq.gz
CRX019703 ChIP-Seq (H3K4me2) of CSC Homo sapiens Illumina HiSeq 2000 SAMC016541
CRS014236
Run Accession Run Alias Run Data File Information
CRR021476 CSC_H3K4me2_BiologicalReplicate1 File: CRR021476.fastq.gz
CRR021477 CSC_H3K4me2_BiologicalReplicate2 File: CRR021477.fastq.gz
CRR021478 CSC_H3K4me2_Input File: CRR021478.fastq.gz
CRX019702 Whole Genome Bisulfite Sequencing of NCSC Homo sapiens Illumina HiSeq 2000 SAMC016542
CRS014242
Run Accession Run Alias Run Data File Information
CRR021471 NCSC_WGBS File: CRR021471_f1.fastq.gz
File: CRR021471_r2.fastq.gz
CRX019701 Whole Genome Bisulfite Sequencing of CSC Homo sapiens Illumina HiSeq 2000 SAMC016541
CRS014236
Run Accession Run Alias Run Data File Information
CRR021470 CSC_WGBS File: CRR021470_f1.fastq.gz
File: CRR021470_r2.fastq.gz
CRX019699 RNA-Seq of NCSC Homo sapiens Illumina HiSeq 2000 SAMC016542
CRS014242
Run Accession Run Alias Run Data File Information
CRR021469 NCSC_RNAseq File: CRR021469_f1.fastq.gz
File: CRR021469_r2.fastq.gz
CRX019693 RNA-Seq of CSC Homo sapiens Illumina HiSeq 2000 SAMC016541
CRS014236
Run Accession Run Alias Run Data File Information
CRR021468 CSC_RNAseq File: CRR021468_f1.fastq.gz
File: CRR021468_r2.fastq.gz
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Submitter:Ke An (anke@big.ac.cn)
Organizations:Beijing Institute of Genomics, Chinese Academy of Sciences
Date submitted:2017-09-04