Experiment information
Accession CRX028902
Organism Gastrodia elata
Title the genome of Gastrodia elata 2000
BioProject PRJCA000931
BioSample SAMC044637
Platform Illumina HiSeq 2500
Library
Library name Construction protocol Strategy Source Selection Layout
The experimental materials of Gastrodia elatawere harvested from Xiaocaoba in Yunnan Province located in the southwestern China. Genome sequencing and assembly was done on the scape of beige-scape G. elata. Multiple paired-end and mate-pair libraries were constructed with a spanning size that ranged from 180 bp to 20 kb. Sequencing was conducted on an Illumina HiSeq 2500 platform. WGS GENOMIC unspecified PAIRED
Processing Planned read length (bp) for mate 1: 250
Planned read length (bp) for mate 2: 250
Insert size (bp): 2000
Release date2018-08-15
Run
Run Accession Release date Run Data File Information
File nameFile size (MB)
CRR032149 2018-08-15 DEL00311_L6_1_clean.matepaired.fq.gz
DEL00311_L6_2_clean.matepaired.fq.gz
599.93
629.72
CRR032150 2018-08-15 DEL00311_L6_1_clean.negative.fq.gz
DEL00311_L6_2_clean.negative.fq.gz
316.25
330.35
CRR032151 2018-08-15 DEL00312_L2_1_clean.matepaired.fq.gz
DEL00312_L2_2_clean.matepaired.fq.gz
1,206.86
1,276.33
CRR032152 2018-08-15 DEL00312_L2_1_clean.negative.fq.gz
DEL00312_L2_2_clean.negative.fq.gz
756.29
796.06
CRR032153 2018-08-15 DEL00313_L7_1_clean.matepaired.fq.gz
DEL00313_L7_2_clean.matepaired.fq.gz
1,203.63
1,229.04
CRR032154 2018-08-15 DEL00313_L7_1_clean.negative.fq.gz
DEL00313_L7_2_clean.negative.fq.gz
630.83
641.01
CRR032155 2018-08-15 DEL00314_L2_1_clean.matepaired.fq.gz
DEL00314_L2_2_clean.matepaired.fq.gz
791.04
797.66
CRR032156 2018-08-15 DEL00314_L2_1_clean.negative.fq.gz
DEL00314_L2_2_clean.negative.fq.gz
342.52
344.82
CRR032157 2018-08-15 DEL00314_L4_1_clean.matepaired.fq.gz
DEL00314_L4_2_clean.matepaired.fq.gz
1,314.6
1,350
CRR032158 2018-08-15 DEL00314_L4_1_clean.negative.fq.gz
DEL00314_L4_2_clean.negative.fq.gz
582.03
597.67
CRR032159 2018-08-15 DEL00314_L8_1_clean.matepaired.fq.gz
DEL00314_L8_2_clean.matepaired.fq.gz
204.44
215.36
CRR032160 2018-08-15 DEL00314_L8_1_clean.negative.fq.gz
DEL00314_L8_2_clean.negative.fq.gz
56.51
59.79
SubmitterYuan Yuan (y_yuan0732@163.com)
OrganizationsChina Academy of Chinese Medical Sciences
Date submitted2018-08-14
Related experiments
Experiments(7)