Experiment information
Accession CRX028903
Organism Gastrodia elata
Title the genome of Gastrodia elata 5000
BioProject PRJCA000931
BioSample SAMC044637
Platform Illumina HiSeq 2500
Library
Library name Construction protocol Strategy Source Selection Layout
The experimental materials of Gastrodia elatawere harvested from Xiaocaoba in Yunnan Province located in the southwestern China. Genome sequencing and assembly was done on the scape of beige-scape G. elata. Multiple paired-end and mate-pair libraries were constructed with a spanning size that ranged from 180 bp to 20 kb. Sequencing was conducted on an Illumina HiSeq 2500 platform. WGS GENOMIC unspecified PAIRED
Processing Planned read length (bp) for mate 1: 250
Planned read length (bp) for mate 2: 250
Insert size (bp): 5000
Release date2018-08-15
Run
Run Accession Release date Run Data File Information
File nameFile size (MB)
CRR032161 2018-08-15 DEL00316_L5_1_clean.matepaired.fq.gz
DEL00316_L5_2_clean.matepaired.fq.gz
1,093.45
1,123.01
CRR032162 2018-08-15 DEL00316_L5_1_clean.negative.fq.gz
DEL00316_L5_2_clean.negative.fq.gz
581.91
594.88
CRR032163 2018-08-15 DEL00316_L7_1_clean.matepaired.fq.gz
DEL00316_L7_2_clean.matepaired.fq.gz
147.81
158.43
CRR032164 2018-08-15 DEL00316_L7_1_clean.negative.fq.gz
DEL00316_L7_2_clean.negative.fq.gz
45.32
48.46
CRR032165 2018-08-15 DEL00317_L8_1_clean.matepaired.fq.gz
DEL00317_L8_2_clean.matepaired.fq.gz
1,101.3
1,128.06
CRR032166 2018-08-15 DEL00317_L8_1_clean.negative.fq.gz
DEL00317_L8_2_clean.negative.fq.gz
541.22
552.66
SubmitterYuan Yuan (y_yuan0732@163.com)
OrganizationsChina Academy of Chinese Medical Sciences
Date submitted2018-08-14
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