Experiment information
Accession CRX028905
Organism Gastrodia elata
Title the genome of Gastrodia elata 10000
BioProject PRJCA000931
BioSample SAMC044637
Platform Illumina HiSeq 2500
Library
Library name Construction protocol Strategy Source Selection Layout
The experimental materials of Gastrodia elatawere harvested from Xiaocaoba in Yunnan Province located in the southwestern China. Genome sequencing and assembly was done on the scape of beige-scape G. elata. Multiple paired-end and mate-pair libraries were constructed with a spanning size that ranged from 180 bp to 20 kb. Sequencing was conducted on an Illumina HiSeq 2500 platform. WGS GENOMIC unspecified PAIRED
Processing Planned read length (bp) for mate 1: 250
Planned read length (bp) for mate 2: 250
Insert size (bp): 10000
Release date2018-08-15
Run
Run Accession Release date Run Data File Information
File nameFile size (MB)
CRR032167 2018-08-15 DEL00335_L4_1_clean.matepaired.fq.gz
DEL00335_L4_2_clean.matepaired.fq.gz
579.06
596.15
CRR032168 2018-08-15 DEL00335_L4_1_clean.negative.fq.gz
DEL00335_L4_2_clean.negative.fq.gz
165.44
171.19
CRR032169 2018-08-15 DEL00336_L2_1_clean.matepaired.fq.gz
DEL00336_L2_2_clean.matepaired.fq.gz
541.94
570.26
CRR032170 2018-08-15 DEL00336_L2_1_clean.negative.fq.gz
DEL00336_L2_2_clean.negative.fq.gz
176.33
185.77
CRR032171 2018-08-15 DEL00336_L8_1_clean.matepaired.fq.gz
DEL00336_L8_2_clean.matepaired.fq.gz
141.2
146.31
CRR032172 2018-08-15 DEL00336_L8_1_clean.negative.fq.gz
DEL00336_L8_2_clean.negative.fq.gz
28.83
30
CRR032173 2018-08-15 DEL00337-w_L7_1_clean.matepaired.fq.gz
DEL00337-w_L7_2_clean.matepaired.fq.gz
426.26
444.99
CRR032174 2018-08-15 DEL00337-w_L7_1_clean.negative.fq.gz
DEL00337-w_L7_2_clean.negative.fq.gz
171.93
179.57
SubmitterYuan Yuan (y_yuan0732@163.com)
OrganizationsChina Academy of Chinese Medical Sciences
Date submitted2018-08-14
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