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CRA001773 Information
Title: RNA-Seq for chicken breast muscle
BioProject: PRJCA001556 /
Release date: 2019-11-24
Files: 34
File size: 101.72 GB
Publication
Article title
Dynamic Transcriptomic Analysis of Breast Muscle Development From the Embryonic to Post-hatching Periods in Chickens
Journal name
Frontiers in Genetics
Year
2020
DOI
10.3389/fgene.2019.01308
PubMed ID
31998367

Article title
Transcriptome Analysis Reveals the Profile of Long Non-coding RNAs During Chicken Muscle Development
Journal name
Frontiers in Physiology
Year
2021
DOI
10.3389/fphys.2021.660370
PubMed ID
34040544

Article title
Integrative analysis of circRNA, miRNA, and mRNA profiles to reveal ceRNA regulation in chicken muscle development from the embryonic to post-hatching periods
Journal name
BMC Genomics
Year
2022
DOI
10.1186/s12864-022-08525-5
PubMed ID
35505302

Dataset Downlaod
MetaData:
CRA001773.xlsx
Files:
HTTPS：https://download.cncb.ac.cn/gsa3/CRA001773
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FTP：ftp://download.big.ac.cn/gsa3/CRA001773

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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX052383 D98_3 Gallus gallus Illumina HiSeq 4000 SAMC072618
Run accession Run alias Run data file information
CRR058097 D98_3 File: CRR058097_f1.fq.gz
File: CRR058097_r2.fq.gz
CRX052382 D98_2 Gallus gallus Illumina HiSeq 4000 SAMC072617
Run accession Run alias Run data file information
CRR058096 D98_2 File: CRR058096_f1.fq.gz
File: CRR058096_r2.fq.gz
CRX052381 D98_1 Gallus gallus Illumina HiSeq 4000 SAMC072616
Run accession Run alias Run data file information
CRR058095 D98_1 File: CRR058095_f1.fq.gz
File: CRR058095_r2.fq.gz
CRX052380 D56_3 Gallus gallus Illumina HiSeq 4000 SAMC072615
Run accession Run alias Run data file information
CRR058094 D56_3 File: CRR058094_f1.fq.gz
File: CRR058094_r2.fq.gz
CRX052379 D56_2 Gallus gallus Illumina HiSeq 4000 SAMC072614
Run accession Run alias Run data file information
CRR058093 D56_2 File: CRR058093_f1.fq.gz
File: CRR058093_r2.fq.gz
CRX052378 D56_1 Gallus gallus Illumina HiSeq 4000 SAMC072613
Run accession Run alias Run data file information
CRR058092 D56_1 File: CRR058092_f1.fq.gz
File: CRR058092_r2.fq.gz
CRX052377 D14_3 Gallus gallus Illumina HiSeq 4000 SAMC072612
Run accession Run alias Run data file information
CRR058091 D14_3 File: CRR058091_f1.fq.gz
File: CRR058091_r2.fq.gz
CRX052376 D14_2 Gallus gallus Illumina HiSeq 4000 SAMC072611
Run accession Run alias Run data file information
CRR058090 D14_2 File: CRR058090_f1.fq.gz
File: CRR058090_r2.fq.gz
CRX052375 D14_1 Gallus gallus Illumina HiSeq 4000 SAMC072610
Run accession Run alias Run data file information
CRR058089 D14_1 File: CRR058089_f1.fq.gz
File: CRR058089_r2.fq.gz
CRX052374 D1_3 Gallus gallus Illumina HiSeq 4000 SAMC072609
Run accession Run alias Run data file information
CRR058088 D1_3 File: CRR058088_f1.fq.gz
File: CRR058088_r2.fq.gz
CRX052373 D1_2 Gallus gallus Illumina HiSeq 4000 SAMC072608
Run accession Run alias Run data file information
CRR058087 D1_2 File: CRR058087_f1.fq.gz
File: CRR058087_r2.fq.gz
CRX052372 D1_1 Gallus gallus Illumina HiSeq 4000 SAMC072607
Run accession Run alias Run data file information
CRR058086 D1_1 File: CRR058086_f1.fq.gz
File: CRR058086_r2.fq.gz
CRX052371 E17_2 Gallus gallus Illumina HiSeq 4000 SAMC072606
Run accession Run alias Run data file information
CRR058085 E17_2 File: CRR058085_f1.fq.gz
File: CRR058085_r2.fq.gz
CRX052370 E17_1 Gallus gallus Illumina HiSeq 4000 SAMC072605
Run accession Run alias Run data file information
CRR058084 E17_1 File: CRR058084_f1.fq.gz
File: CRR058084_r2.fq.gz
CRX052369 E12_3 Gallus gallus Illumina HiSeq 4000 SAMC072604
Run accession Run alias Run data file information
CRR058083 E12_3 File: CRR058083_f1.fq.gz
File: CRR058083_r2.fq.gz
CRX052368 E12_2 Gallus gallus Illumina HiSeq 4000 SAMC072603
Run accession Run alias Run data file information
CRR058082 E12_2 File: CRR058082_f1.fq.gz
File: CRR058082_r2.fq.gz
CRX052367 E12_1 Gallus gallus Illumina HiSeq 4000 SAMC072602
Run accession Run alias Run data file information
CRR058081 E12_1 File: CRR058081_f1.fq.gz
File: CRR058081_r2.fq.gz
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Submitter:jie liu (liujie84130@163.com)
Organization:Poultry Institute, Shandong Academy of Agricultural Sciences
Date submitted:2019-07-05