Experiment information
Accession CRX061284
Organism Macaca mulatta
Title rheMacS HiC data
BioProject PRJCA001197
BioSample SAMC053454
Platform Illumina HiSeq X Ten
Library
Library name Construction protocol Strategy Source Selection Layout
Two Hi-C libraries were prepared as described previously (Lieberman-Aiden, et al. 2009). Libraries were sequenced on an Illumina X10, which generated 308 Gbp (PE150) data with 103-fold genomic coverage. Hi-C GENOMIC unspecified PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Insert size (bp): 400
Release date2019-09-03
Run
Run Accession Release date Run Data File Information
File nameFile size (MB)
CRR071913 2019-09-03 R17003029-06013-MEF-Hi-C-lib1_combined-1_R1.fastq.gz
R17003029-06013-MEF-Hi-C-lib1_combined-1_R2.fastq.gz
8,234.75
9,282.62
CRR071914 2019-09-03 R17003030-06013-MEF-Hi-C-lib2_combined-2_R1.fastq.gz
R17003030-06013-MEF-Hi-C-lib2_combined-2_R2.fastq.gz
8,166.33
9,495.81
CRR071915 2019-09-03 R17003029-06013-MEF-Hi-C-lib1_combined-3_R1.fastq.gz
R17003029-06013-MEF-Hi-C-lib1_combined-3_R2.fastq.gz
2,371.42
2,833.31
CRR071916 2019-09-03 R17003030-06013-MEF-Hi-C-lib2_combined-4_R1.fastq.gz
R17003030-06013-MEF-Hi-C-lib2_combined-4_R2.fastq.gz
3,033.11
3,851.71
CRR071917 2019-09-03 R17003029-06013-MEF-Hi-C-lib1_combined-5_R1.fastq.gz
R17003029-06013-MEF-Hi-C-lib1_combined-5_R2.fastq.gz
26,956.91
29,875.98
CRR071918 2019-09-03 R17003030-06013-MEF-Hi-C-lib2_combined-6_R1.fastq.gz
R17003030-06013-MEF-Hi-C-lib2_combined-6_R2.fastq.gz
26,995.58
29,834.02
SubmitterYaoxi He (heyaoxi@mail.kiz.ac.cn)
OrganizationsKunming Institute of Zoology, Chinese Academy of Sciences
Date submitted2019-08-30