CRA001148 Information
Title: Discovery of unique single nucleotide polymorphisms associated with high nighttime temperature stress in rice using a hybrid sequencing strategy
BioProject: PRJCA001057 /
Release date: 2018-10-17
Files: 473
File size: 207.24 GB
Publication
Journal name
Environmental and Experimental Botany
Year
2019
DOI
10.1016/j.envexpbot.2019.02.005
PubMed ID

Journal name
Agronomy
Year
2018
DOI
10.3390/agronomy8110247
PubMed ID

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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX030673 XN0437T_Transcriptome_C1 Oryza sativa Illumina HiSeq 2500 SAMC046969
Run accession Run alias Run data file information
CRR034237 XN0437T_Transcriptome_C1_L004_001 File: CRR034237_f1.fastq.gz
File: CRR034237_r2.fastq.gz
CRR034238 XN0437T_Transcriptome_C1_L004_002 File: CRR034238_f1.fastq.gz
File: CRR034238_r2.fastq.gz
CRR034239 XN0437T_Transcriptome_C1_L004_003 File: CRR034239_f1.fastq.gz
File: CRR034239_r2.fastq.gz
CRR034240 XN0437T_Transcriptome_C1_L004_004 File: CRR034240_f1.fastq.gz
File: CRR034240_r2.fastq.gz
CRR034241 XN0437T_Transcriptome_C1_L004_005 File: CRR034241_f1.fastq.gz
File: CRR034241_r2.fastq.gz
CRR034242 XN0437T_Transcriptome_C1_L004_006 File: CRR034242_f1.fastq.gz
File: CRR034242_r2.fastq.gz
CRR034243 XN0437T_Transcriptome_C1_L004_007 File: CRR034243_f1.fastq.gz
File: CRR034243_r2.fastq.gz
CRR034244 XN0437T_Transcriptome_C1_L004_008 File: CRR034244_f1.fastq.gz
File: CRR034244_r2.fastq.gz
CRR034245 XN0437T_Transcriptome_C1_L004_009 File: CRR034245_f1.fastq.gz
File: CRR034245_r2.fastq.gz
CRR034246 XN0437T_Transcriptome_C1_L004_010 File: CRR034246_f1.fastq.gz
File: CRR034246_r2.fastq.gz
CRR034247 XN0437T_Transcriptome_C1_L004_011 File: CRR034247_f1.fastq.gz
File: CRR034247_r2.fastq.gz
CRR034248 XN0437T_Transcriptome_C1_L004_012 File: CRR034248_f1.fastq.gz
File: CRR034248_r2.fastq.gz
CRR034249 XN0437T_Transcriptome_C1_L004_013 File: CRR034249_f1.fastq.gz
File: CRR034249_r2.fastq.gz
CRR034250 XN0437T_Transcriptome_C1_L004_014 File: CRR034250_f1.fastq.gz
File: CRR034250_r2.fastq.gz
CRX030672 XN0437T_Transcriptome_T3 Oryza sativa Illumina HiSeq 2500 SAMC046968
Run accession Run alias Run data file information
CRR034222 XN0437T_Transcriptome_T3_L005_001 File: CRR034222_f1.fastq.gz
File: CRR034222_r2.fastq.gz
CRR034223 XN0437T_Transcriptome_T3_L005_002 File: CRR034223_f1.fastq.gz
File: CRR034223_r2.fastq.gz
CRR034224 XN0437T_Transcriptome_T3_L005_003 File: CRR034224_f1.fastq.gz
File: CRR034224_r2.fastq.gz
CRR034225 XN0437T_Transcriptome_T3_L005_004 File: CRR034225_f1.fastq.gz
File: CRR034225_r2.fastq.gz
CRR034226 XN0437T_Transcriptome_T3_L005_005 File: CRR034226_f1.fastq.gz
File: CRR034226_r2.fastq.gz
CRR034227 XN0437T_Transcriptome_T3_L005_006 File: CRR034227_f1.fastq.gz
File: CRR034227_r2.fastq.gz
CRR034228 XN0437T_Transcriptome_T3_L005_007 File: CRR034228_f1.fastq.gz
File: CRR034228_r2.fastq.gz
CRR034229 XN0437T_Transcriptome_T3_L005_008 File: CRR034229_f1.fastq.gz
File: CRR034229_r2.fastq.gz
CRR034230 XN0437T_Transcriptome_T3_L005_009 File: CRR034230_f1.fastq.gz
File: CRR034230_r2.fastq.gz
CRR034231 XN0437T_Transcriptome_T3_L005_010 File: CRR034231_f1.fastq.gz
File: CRR034231_r2.fastq.gz
CRR034232 XN0437T_Transcriptome_T3_L005_011 File: CRR034232_f1.fastq.gz
File: CRR034232_r2.fastq.gz
CRR034233 XN0437T_Transcriptome_T3_L005_012 File: CRR034233_f1.fastq.gz
File: CRR034233_r2.fastq.gz
CRR034234 XN0437T_Transcriptome_T3_L005_013 File: CRR034234_f1.fastq.gz
File: CRR034234_r2.fastq.gz
CRR034235 XN0437T_Transcriptome_T3_L005_014 File: CRR034235_f1.fastq.gz
File: CRR034235_r2.fastq.gz
CRR034236 XN0437T_Transcriptome_T3_L005_015 File: CRR034236_f1.fastq.gz
File: CRR034236_r2.fastq.gz
CRX030671 XN0437T_Transcriptome_T2 Oryza sativa Illumina HiSeq 2500 SAMC046967
Run accession Run alias Run data file information
CRR034207 XN0437T_Transcriptome_T2_L005_001 File: CRR034207_f1.fastq.gz
File: CRR034207_r2.fastq.gz
CRR034208 XN0437T_Transcriptome_T2_L005_002 File: CRR034208_f1.fastq.gz
File: CRR034208_r2.fastq.gz
CRR034209 XN0437T_Transcriptome_T2_L005_003 File: CRR034209_f1.fastq.gz
File: CRR034209_r2.fastq.gz
CRR034210 XN0437T_Transcriptome_T2_L005_004 File: CRR034210_f1.fastq.gz
File: CRR034210_r2.fastq.gz
CRR034211 XN0437T_Transcriptome_T2_L005_005 File: CRR034211_f1.fastq.gz
File: CRR034211_r2.fastq.gz
CRR034212 XN0437T_Transcriptome_T2_L005_006 File: CRR034212_f1.fastq.gz
File: CRR034212_r2.fastq.gz
CRR034213 XN0437T_Transcriptome_T2_L005_007 File: CRR034213_f1.fastq.gz
File: CRR034213_r2.fastq.gz
CRR034214 XN0437T_Transcriptome_T2_L005_008 File: CRR034214_f1.fastq.gz
File: CRR034214_r2.fastq.gz
CRR034215 XN0437T_Transcriptome_T2_L005_009 File: CRR034215_f1.fastq.gz
File: CRR034215_r2.fastq.gz
CRR034216 XN0437T_Transcriptome_T2_L005_010 File: CRR034216_f1.fastq.gz
File: CRR034216_r2.fastq.gz
CRR034217 XN0437T_Transcriptome_T2_L005_011 File: CRR034217_f1.fastq.gz
File: CRR034217_r2.fastq.gz
CRR034218 XN0437T_Transcriptome_T2_L005_012 File: CRR034218_f1.fastq.gz
File: CRR034218_r2.fastq.gz
CRR034219 XN0437T_Transcriptome_T2_L005_013 File: CRR034219_f1.fastq.gz
File: CRR034219_r2.fastq.gz
CRR034220 XN0437T_Transcriptome_T2_L005_014 File: CRR034220_f1.fastq.gz
File: CRR034220_r2.fastq.gz
CRR034221 XN0437T_Transcriptome_T2_L005_015 File: CRR034221_f1.fastq.gz
File: CRR034221_r2.fastq.gz
CRX030670 XN0437T_Transcriptome_T1 Oryza sativa Illumina HiSeq 2500 SAMC046966
Run accession Run alias Run data file information
CRR034192 XN0437T_Transcriptome_T1_L005_001 File: CRR034192_f1.fastq.gz
File: CRR034192_r2.fastq.gz
CRR034193 XN0437T_Transcriptome_T1_L005_002 File: CRR034193_f1.fastq.gz
File: CRR034193_r2.fastq.gz
CRR034194 XN0437T_Transcriptome_T1_L005_003 File: CRR034194_f1.fastq.gz
File: CRR034194_r2.fastq.gz
CRR034195 XN0437T_Transcriptome_T1_L005_004 File: CRR034195_f1.fastq.gz
File: CRR034195_r2.fastq.gz
CRR034196 XN0437T_Transcriptome_T1_L005_005 File: CRR034196_f1.fastq.gz
File: CRR034196_r2.fastq.gz
CRR034197 XN0437T_Transcriptome_T1_L005_006 File: CRR034197_f1.fastq.gz
File: CRR034197_r2.fastq.gz
CRR034198 XN0437T_Transcriptome_T1_L005_007 File: CRR034198_f1.fastq.gz
File: CRR034198_r2.fastq.gz
CRR034199 XN0437T_Transcriptome_T1_L005_008 File: CRR034199_f1.fastq.gz
File: CRR034199_r2.fastq.gz
CRR034200 XN0437T_Transcriptome_T1_L005_009 File: CRR034200_f1.fastq.gz
File: CRR034200_r2.fastq.gz
CRR034201 XN0437T_Transcriptome_T1_L005_010 File: CRR034201_f1.fastq.gz
File: CRR034201_r2.fastq.gz
CRR034202 XN0437T_Transcriptome_T1_L005_011 File: CRR034202_f1.fastq.gz
File: CRR034202_r2.fastq.gz
CRR034203 XN0437T_Transcriptome_T1_L005_012 File: CRR034203_f1.fastq.gz
File: CRR034203_r2.fastq.gz
CRR034204 XN0437T_Transcriptome_T1_L005_013 File: CRR034204_f1.fastq.gz
File: CRR034204_r2.fastq.gz
CRR034205 XN0437T_Transcriptome_T1_L005_014 File: CRR034205_f1.fastq.gz
File: CRR034205_r2.fastq.gz
CRR034206 XN0437T_Transcriptome_T1_L005_015 File: CRR034206_f1.fastq.gz
File: CRR034206_r2.fastq.gz
CRX030669 TGS for the full-length mRNA sequences - 3-6kb Oryza sativa PacBio RS II SAMC046965
Run accession Run alias Run data file information
CRR034191 Full_length_mRNA_sequencing_3-6K_cell_1_01 File: CRR034191.fastq.gz
CRR034455 Full_length_mRNA_sequencing_3-6K_cell_1_02 File: CRR034455.fastq.gz
CRR034456 Full_length_mRNA_sequencing_3-6K_cell_1_03 File: CRR034456.fastq.gz
CRX030668 TGS for the full-length mRNA sequences - 2-3kb Oryza sativa PacBio RS II SAMC046965
Run accession Run alias Run data file information
CRR034190 Full_length_mRNA_sequencing_2-3K_cell_1_01 File: CRR034190.fastq.gz
CRR034450 Full_length_mRNA_sequencing_2-3K_cell_1_02 File: CRR034450.fastq.gz
CRR034451 Full_length_mRNA_sequencing_2-3K_cell_1_03 File: CRR034451.fastq.gz
CRR034452 Full_length_mRNA_sequencing_2-3K_cell_2_01 File: CRR034452.fastq.gz
CRR034453 Full_length_mRNA_sequencing_2-3K_cell_2_02 File: CRR034453.fastq.gz
CRR034454 Full_length_mRNA_sequencing_2-3K_cell_2_03 File: CRR034454.fastq.gz
CRX030667 TGS for the full-length mRNA sequences - 1-2 kb Oryza sativa PacBio RS II SAMC046965
Run accession Run alias Run data file information
CRR034189 Full_length_mRNA_sequencing_1-2K_cell_1_01 File: CRR034189.fastq.gz
CRR034445 Full_length_mRNA_sequencing_1-2K_cell_1_02 File: CRR034445.fastq.gz
CRR034446 Full_length_mRNA_sequencing_1-2K_cell_1_03 File: CRR034446.fastq.gz
CRR034447 Full_length_mRNA_sequencing_1-2K_cell_2_01 File: CRR034447.fastq.gz
CRR034448 Full_length_mRNA_sequencing_1-2K_cell_2_02 File: CRR034448.fastq.gz
CRR034449 Full_length_mRNA_sequencing_1-2K_cell_2_03 File: CRR034449.fastq.gz
Submitter:Liao Jiang-Lin (jlliao514815@163.com)
Organization:Jiangxi Agricultural University
Date submitted:2018-10-07