Total holdings
Total experiments Released experiments Confidential experiments
19552 5825 13727

Total runs Released runs Confidential runs
21431 6815 14616
Sample type
Sample type Experiments Runs
Plant sample 3838 4517
Human sample 1066 1193
Model organism or animal sample 613 795
Microbe 245 247
Environmental, food or other pathogen 60 60
Virus sample 3 3
Organisms
Organism Experiments Runs
Fagopyrum tataricum 1688 1688
Zea mays 1444 1467
Homo sapiens 1070 1187
Oryza sativa 621 1253
Mus musculus 246 264
synthetic metagenome 144 144
Canis sp. 127 127
gut metagenome 60 60
Macaca mulatta 43 126
Litopenaeus vannamei 30 30
Sus scrofa 30 30
Plasmid vector pSP189 28 28
Ailuropoda melanoleuca 27 27
Drosophila melanogaster 25 25
Escherichia coli 24 24
Enterobacteria phage phiX174 sensu lato 23 23
Kappaphycus alvarezii 18 18
Saccharomyces cerevisiae 18 18
Mus sp. 15 15
Ipomoea batatas 14 16
metagenome 14 13
Prunus mume 13 12
Danio rerio 12 24
Rosa odorata 12 12
Bos grunniens 9 9
Rosa chinensis 9 9
Mycobacterium tuberculosis 8 8
Oreochromis niloticus 7 6
Cistanche deserticola 6 6
Cocos nucifera 4 14
Strongylocentrotus intermedius 4 4
Tupaia belangeri 4 4
Pan troglodytes 4 72
Populus trichocarpa 4 4
Bos taurus 3 4
Corydoras panda 2 1
Mycobacterium bovis 2 2
Umbilicaria americana 2 3
Ipomoea trifida 2 4
Ixodes persulcatus 1 3
Mycobacterium microti 1 1
human blood metagenome 1 10
Mycobacterium africanum 1 1
Triticum dicoccoides 1 4
Arabidopsis thaliana 1 6
Mus musculus cytomegalovirus 2 1 2
Prunus persica 1 4
Lactobacillus plantarum 1 1
Platforms
Platform Experiments Runs
Illumina HiSeq 2500 4098 4718
Illumina HiSeq 2000 1231 1477
Illumina HiSeq X-10 107 110
Illumina HiScanSQ 72 72
Illumina MiSeq 61 61
Illumina HiSeq 4000 53 56
AB SOLiD System 3.0 43 43
PacBio RS 36 100
Illumina Genome Analyzer 29 46
Illumina Genome Analyzer II 23 23
Illumina HiSeq 3000 18 34
Illumina Nextseq 500 12 12
Ion Torrent PGM 9 8
AB 5500xl Genetic Analyzer 7 7
AB 3730xL Genetic Analyzer 4 4
454 GS 20 3 10
454 GS FLX Titanium 2 12
AB 3730 Genetic Analyzer 1 3