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Experiment information
Accession CRX000128
Organism Homo sapiens
Title Loss of 5-hydroxymethylcytosine is linked to gene body hypermethylation in kidney cancer
BioProject PRJCA000102
BioSample SAMC000292
Platform Illumina HiSeq 2000
Library
Library name Construction protocol Strategy Source Selection Layout
tab-seq The sequencing libraries were constructed as described with minor modification. Briefly, genomic DNA with spike-in controls was glucoslyated and oxidized using the kit from Wisegene (Cat#: K001). Then, the DNA was further directed to bisulfite conversion Bisulfite-Seq GENOMIC unspecified SINGLE
Processing Planned read length (bp): 100
Release date2016-03-18
Run
Run accession Run data file information
File nameFile size (MB)
CRR000142 CRD000391
CRD000392
CRD000393
CRD000394
CRD000423
CRD000400 		1,300.15
1,179.2
1,974.95
1,736.99
15,987.54
15,025.87
CRR000143 CRD000401
CRD000402
CRD000395
CRD000396
CRD000397
CRD000398 		16,138.42
15,211.12
1,310.62
1,201.03
318.86
282.08
CRR000145 CRD000403
CRD000404
CRD000405
CRD000406
CRD000407
CRD000408 		15,016.07
14,285.95
9,295.39
8,478.24
2,622.69
2,386.17
CRR000148 CRD000409
CRD000410
CRD000411
CRD000412
CRD000413
CRD000414 		11,963.16
11,250.96
4,010.2
3,640.33
12,623.38
12,161.99
CRR000149 CRD000331
CRD000332
CRD000333
CRD000339 		29,715.38
27,145.61
31,603.28
28,912.19
SubmitterZhengZheng Xu (xdzperfect@163.com)
OrganizationBeijing Institute of Genomics, Chinese Academy of Sciences
Date submitted2015-11-17
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Experiments(3)