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Experiment information
Accession CRX019447
Organism Pseudomonadota
Title start experiment_rep1
BioProject PRJCA000532
BioSample SAMC016304
Platform Illumina MiSeq
Library
Library name Construction protocol Strategy Source Selection Layout
HONO denitrification All amplicons per time point and replicate were pooled on a mass basis to yield 18 amplicon pools in total: 16S rRNA : narG : napA : nrfA : nirS : nirK = 46 : 15 : 21 : 10 : 8. Adaptamers including barcodes were ligated to amplicon pools for sequencing library generation according to standard protocols prior to paired-end sequencing on a Illumina MiSeq platform utilizing V2 chemistry (2 x 250 bp). AMPLICON TRANSCRIPTOMIC RT-PCR PAIRED
Processing Planned read length (bp) for mate 1: 250
Planned read length (bp) for mate 2: 250
Insert size (bp): 50
Release date2019-02-09
Run
Run accession Run data file information
File nameFile size (MB)
CRR021101 CRR021101_f1.fastq.gz
CRR021101_r2.fastq.gz 		2.64
3.41
CRR021430 CRR021430_f1.fastq.gz
CRR021430_r2.fastq.gz 		3.03
2.24
CRR021431 CRR021431_f1.fastq.gz
CRR021431_r2.fastq.gz 		1.23
1.45
CRR021432 CRR021432_f1.fastq.gz
CRR021432_r2.fastq.gz 		1.48
1.33
CRR021433 CRR021433_f1.fastq.gz
CRR021433_r2.fastq.gz 		0.42
0.6
CRR021434 CRR021434_f1.fastq.gz
CRR021434_r2.fastq.gz 		0.74
0.53
CRR021435 CRR021435_f1.fastq.gz
CRR021435_r2.fastq.gz 		3.94
4.94
CRR021436 CRR021436_f1.fastq.gz
CRR021436_r2.fastq.gz 		5.12
4.09
CRR021437 CRR021437_f1.fastq.gz
CRR021437_r2.fastq.gz 		2.48
3.33
CRR021438 CRR021438_f1.fastq.gz
CRR021438_r2.fastq.gz 		3.72
2.85
CRR021439 CRR021439_f1.fastq.gz
CRR021439_r2.fastq.gz 		0.06
0.08
CRR021440 CRR021440_f1.fastq.gz
CRR021440_r2.fastq.gz 		0.08
0.06
SubmitterDianming Wu (dmwu@geo.ecnu.edu.cn)
OrganizationEast China Normal University
Date submitted2017-08-28
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