Experiment information
Accession CRX019718
Organism Pseudomonadota
Title half an hour after the experiment started_rep2
BioProject PRJCA000532
BioSample SAMC016304
Platform Illumina MiSeq
Library
Library name Construction protocol Strategy Source Selection Layout
All amplicons per time point and replicate were pooled on a mass basis to yield 18 amplicon pools in total: 16S rRNA : narG : napA : nrfA : nirS : nirK = 46 : 15 : 21 : 10 : 8. Adaptamers including barcodes were ligated to amplicon pools for sequencing library generation according to standard protocols prior to paired-end sequencing on a Illumina MiSeq platform utilizing V2 chemistry (2 x 250 bp). RNA-Seq TRANSCRIPTOMIC RT-PCR PAIRED
Processing Planned read length (bp) for mate 1: 250
Planned read length (bp) for mate 2: 250
Insert size (bp): 50
Release date2019-02-09
Run
Run accession Run data file information
File nameFile size (MB)
CRR021512 CRR021512_f1.fastq.gz
CRR021512_r2.fastq.gz
11.13
14.32
CRR021513 CRR021513_f1.fastq.gz
CRR021513_r2.fastq.gz
12.77
9.48
CRR021514 CRR021514_f1.fastq.gz
CRR021514_r2.fastq.gz
5.74
7.18
CRR021515 CRR021515_f1.fastq.gz
CRR021515_r2.fastq.gz
7.57
6.17
CRR021516 CRR021516_f1.fastq.gz
CRR021516_r2.fastq.gz
1.7
2.41
CRR021517 CRR021517_f1.fastq.gz
CRR021517_r2.fastq.gz
3.11
2.25
CRR021518 CRR021518_f1.fastq.gz
CRR021518_r2.fastq.gz
16.42
20.09
CRR021519 CRR021519_f1.fastq.gz
CRR021519_r2.fastq.gz
20.77
17.24
CRR021520 CRR021520_f1.fastq.gz
CRR021520_r2.fastq.gz
10.74
14.6
CRR021521 CRR021521_f1.fastq.gz
CRR021521_r2.fastq.gz
15.64
12
CRR021522 CRR021522_f1.fastq.gz
CRR021522_r2.fastq.gz
0.26
0.37
CRR021523 CRR021523_f1.fastq.gz
CRR021523_r2.fastq.gz
0.38
0.27
SubmitterDianming Wu (dmwu@geo.ecnu.edu.cn)
OrganizationEast China Normal University
Date submitted2017-09-06