Experiment information
Accession CRX019728
Organism Pseudomonadota
Title end of the experiment_rep3
BioProject PRJCA000532
BioSample SAMC016304
Platform Illumina MiSeq
Library
Library name Construction protocol Strategy Source Selection Layout
All amplicons per time point and replicate were pooled on a mass basis to yield 18 amplicon pools in total: 16S rRNA : narG : napA : nrfA : nirS : nirK = 46 : 15 : 21 : 10 : 8. Adaptamers including barcodes were ligated to amplicon pools for sequencing library generation according to standard protocols prior to paired-end sequencing on a Illumina MiSeq platform utilizing V2 chemistry (2 x 250 bp). RNA-Seq TRANSCRIPTOMIC RT-PCR PAIRED
Processing Planned read length (bp) for mate 1: 250
Planned read length (bp) for mate 2: 250
Insert size (bp): 50
Release date2019-02-09
Run
Run accession Run data file information
File nameFile size (MB)
CRR021632 CRR021632_f1.fastq.gz
CRR021632_r2.fastq.gz
5.6
7.34
CRR021633 CRR021633_f1.fastq.gz
CRR021633_r2.fastq.gz
7.41
5.39
CRR021634 CRR021634_f1.fastq.gz
CRR021634_r2.fastq.gz
2.99
3.91
CRR021635 CRR021635_f1.fastq.gz
CRR021635_r2.fastq.gz
3.99
3.08
CRR021636 CRR021636_f1.fastq.gz
CRR021636_r2.fastq.gz
1.11
1.58
CRR021637 CRR021637_f1.fastq.gz
CRR021637_r2.fastq.gz
2.11
1.5
CRR021638 CRR021638_f1.fastq.gz
CRR021638_r2.fastq.gz
6.75
8.18
CRR021639 CRR021639_f1.fastq.gz
CRR021639_r2.fastq.gz
8.21
6.8
CRR021640 CRR021640_f1.fastq.gz
CRR021640_r2.fastq.gz
14.67
20.12
CRR021641 CRR021641_f1.fastq.gz
CRR021641_r2.fastq.gz
21.34
16.25
CRR021642 CRR021642_f1.fastq.gz
CRR021642_r2.fastq.gz
0.66
0.98
CRR021643 CRR021643_f1.fastq.gz
CRR021643_r2.fastq.gz
0.91
0.68
SubmitterDianming Wu (dmwu@geo.ecnu.edu.cn)
OrganizationEast China Normal University
Date submitted2017-09-06