CRA000980 Information
Title: maize epigenomics and genome-wide chromatin interactions
BioProject: PRJCA000911 /
Release date: 2019-06-19
Files: 44
File size: 106.32 GB
Publication
Journal name
Nature Communications
Year
2019
DOI
10.1038/s41467-019-10602-5
PubMed ID
31201335

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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX041612 maize RNA-Seq rep3 Zea mays Illumina HiSeq X Ten SAMC065453
Run accession Run alias Run data file information
CRR046364 RNA-Seq rep3 File: CRR046364_f1.fq.gz
File: CRR046364_r2.fq.gz
CRX041611 maize RNA-Seq rep2 Zea mays Illumina HiSeq X Ten SAMC065451
Run accession Run alias Run data file information
CRR046363 RNA-Seq rep2 File: CRR046363_f1.fq.gz
File: CRR046363_r2.fq.gz
CRX041610 maize RNA-Seq rep1 Zea mays Illumina HiSeq X Ten SAMC043773
Run accession Run alias Run data file information
CRR046362 RNA-Seq rep1 File: CRR046362_f1.fq.gz
File: CRR046362_r2.fq.gz
CRX028171 maize input ChIP-seq Zea mays Illumina HiSeq X Ten SAMC043773
Run accession Run alias Run data file information
CRR031303 input ChIP-seq File: CRR031303_f1.fastq.gz
File: CRR031303_r2.fastq.gz
CRX027826 maize H3K4me3 ChIA-PET rep2 Zea mays Illumina HiSeq X Ten SAMC065451
Run accession Run alias Run data file information
CRR030947 H3K4me3 ChIA-PET rep2 File: CRR030947_f1.fastq.gz
File: CRR030947_r2.fastq.gz
CRR030948 H3K4me3 ChIA-PET rep2 additional File: CRR030948_f1.fastq.gz
File: CRR030948_r2.fastq.gz
CRX027825 maize H3K4me3 ChIA-PET rep1 Zea mays Illumina HiSeq X Ten SAMC043773
Run accession Run alias Run data file information
CRR030945 H3K4me3 ChIA-PET rep1 File: CRR030945_f1.fastq.gz
File: CRR030945_r2.fastq.gz
CRR030946 H3K4me3 ChIA-PET rep1 additional File: CRR030946_f1.fastq.gz
File: CRR030946_r2.fastq.gz
CRX027824 maize RNAPII ChIA-PET rep2 Zea mays Illumina HiSeq X Ten SAMC065451
Run accession Run alias Run data file information
CRR030943 RNAPII ChIA-PET rep2 File: CRR030943_f1.fq.gz
File: CRR030943_r2.fq.gz
CRR030944 RNAPII ChIA-PET rep2 additional File: CRR030944_f1.fastq.gz
File: CRR030944_r2.fastq.gz
CRX027823 maize RNAPII ChIA-PET rep1 Zea mays Illumina HiSeq X Ten SAMC043773
Run accession Run alias Run data file information
CRR030941 RNAPII ChIA-PET rep1 File: CRR030941_f1.fastq.gz
File: CRR030941_r2.fastq.gz
CRR030942 RNAPII ChIA-PET rep1 additional File: CRR030942_f1.fastq.gz
File: CRR030942_r2.fastq.gz
CRX027822 maize H3K27ac ChIP-seq rep2 Zea mays Illumina HiSeq X Ten SAMC065451
Run accession Run alias Run data file information
CRR030940 H3K27ac ChIP-seq rep2 File: CRR030940_f1.fastq.gz
File: CRR030940_r2.fastq.gz
CRX027821 maize H3K27ac ChIP-seq rep1 Zea mays Illumina HiSeq X Ten SAMC043773
Run accession Run alias Run data file information
CRR030939 H3K27ac ChIP-seq rep1 File: CRR030939_f1.fastq.gz
File: CRR030939_r2.fastq.gz
CRX027820 maize H3K27me3 ChIP-seq rep2 Zea mays Illumina HiSeq X Ten SAMC065451
Run accession Run alias Run data file information
CRR030938 H3K27me3 ChIP-seq rep2 File: CRR030938_f1.fq.gz
File: CRR030938_r2.fq.gz
CRX027819 maize H3K27me3 ChIP-seq rep1 Zea mays Illumina HiSeq X Ten SAMC043773
Run accession Run alias Run data file information
CRR030937 H3K27me3 ChIP-seq rep1 File: CRR030937_f1.fastq.gz
File: CRR030937_r2.fastq.gz
CRX027818 maize H3K4me3 ChIP-seq rep2 Zea mays Illumina HiSeq X Ten SAMC065451
Run accession Run alias Run data file information
CRR030936 H3K4me3 ChIP-seq rep2 File: CRR030936_f1.fastq.gz
File: CRR030936_r2.fastq.gz
CRX027817 maize H3K4me3 ChIP-seq rep1 Zea mays Illumina HiSeq X Ten SAMC043773
Run accession Run alias Run data file information
CRR030935 H3K4me3 ChIP-seq rep1 File: CRR030935_f1.fastq.gz
File: CRR030935_r2.fastq.gz
CRX027816 maize H3K4me1 ChIP-seq rep2 Zea mays Illumina HiSeq X Ten SAMC065451
Run accession Run alias Run data file information
CRR030934 H3K4me1 ChIP-seq rep2 File: CRR030934_f1.fq.gz
File: CRR030934_r2.fq.gz
CRX027815 maize H3K4me1 ChIP-seq rep1 Zea mays Illumina HiSeq X Ten SAMC043773
Run accession Run alias Run data file information
CRR030933 H3K4me1 ChIP-seq rep1 File: CRR030933_f1.fastq.gz
File: CRR030933_r2.fastq.gz
CRX027814 maize RNAPII ChIP-seq rep2 Zea mays Illumina HiSeq X Ten SAMC065451
Run accession Run alias Run data file information
CRR030932 RNAPII ChIP-seq rep2 File: CRR030932_f1.fastq.gz
File: CRR030932_r2.fastq.gz
CRX027813 maize RNAPII ChIP-seq rep1 Zea mays Illumina HiSeq X Ten SAMC043773
Run accession Run alias Run data file information
CRR030930 RNAPII_ChIP-seq_rep1 File: CRR030930_f1.fastq.gz
File: CRR030930_r2.fastq.gz
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Submitter:dan xiong (dan-xiong@outlook.com)
Organization:Huazhong Agricultural University
Date submitted:2018-06-15