Accession | CRX030660 |
Organism | Mus musculus |
Title | ESC_late |
BioProject | PRJCA000997 |
BioSample | SAMC046984 |
Platform | Illumina HiSeq 4000 |
Library |
Library name |
Construction protocol |
Strategy |
Source |
Selection |
Layout |
|
Reduced representation bisulfite sequencing (RRBS) for a global DNA methylation analysis of wild type (WT) or the differentially methylated region knocking out (DMR-KO) haploid ESCs androgenetic haploid ESCs (ahESC), parthenogenetic haploid ESCs (phESCs), diploid ESCs, embryos and brain tissue. Compared to wild type (WT) embryo, which was produced by normal zygote deriving from normal sperm and oocyte, the bimaternal (BM) embryo was produced through injecting a phESC into an MII oocyte and the bipaternal (BP) embryo was produced through injecting injecting an ahESC and a sperm into an enucleated oocyte. |
Bisulfite-Seq |
GENOMIC |
Reduced Representation |
PAIRED
|
|
Processing |
Planned read length (bp) for mate 1: 50
Planned read length (bp) for mate 2: 50
Insert size (bp): 200
|
Release date | 2018-10-17 |
Run |
Run accession |
Run data file information |
File name | File size (MB) |
CRR034177 |
CRR034177_f1.fq.gz
CRR034177_r2.fq.gz
|
1,611.78
1,690.05
|
CRR034178 |
CRR034178_f1.fq.gz
CRR034178_r2.fq.gz
|
1,144.52
1,204.47
|
|
Submitter | Guihai Feng (fenggh@aliyun.com) |
Organization | Institute of Zoology, Chinese Academy of Sciences |
Date submitted | 2018-10-02 |